STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XKV560S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (146 aa)    
Predicted Functional Partners:
A0A0J9X8S8
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 
 0.996
A0A0F7RS81
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.995
A0A0J9X6T5
annotation not available
   
 0.995
A0A0J9XC80
Belongs to the universal ribosomal protein uL22 family.
   
 0.995
A0A0J9XF24
annotation not available
   
 0.995
A0A0J9XF92
annotation not available
   
 0.995
A0A0F7RQM1
Similar to Saccharomyces cerevisiae YGL030W RPL30 Ribosomal 60S subunit protein L30.
   
 0.994
A0A0F7RR25
annotation not available
   
 0.994
A0A0F7RRI9
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.994
A0A0F7RRM8
Belongs to the universal ribosomal protein uL14 family.
   
 0.994
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.