STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XL74Similar to Saccharomyces cerevisiae YGR044C RME1 Zinc finger protein involved in control of meiosis. (327 aa)    
Predicted Functional Partners:
A0A0J9XBR6
Uncharacterized protein.
    
  0.877
A0A0J9XH89
annotation not available
    
  0.682
A0A0J9X8U9
Belongs to the universal ribosomal protein uS2 family.
   
  0.673
A0A0J9X990
annotation not available
   
  0.671
A0A0J9XF23
annotation not available
    
  0.671
A0A0J9XLF8
Belongs to the universal ribosomal protein uS9 family.
    
  0.671
A0A0J9X818
Belongs to the universal ribosomal protein uS15 family.
   
  0.668
A0A0J9X5I7
annotation not available
    
 0.667
A0A0J9X6B7
annotation not available
    
  0.666
A0A0J9XAR9
annotation not available
    
  0.665
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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