Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0F7RS15 | A0A0J9X2E5 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | annotation not available | 0.999 |
A0A0F7RS15 | A0A0J9X4C7 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | annotation not available | 0.999 |
A0A0F7RS15 | A0A0J9YH75 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin. | 0.864 |
A0A0J9X2E5 | A0A0F7RS15 | annotation not available | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.999 |
A0A0J9X2E5 | A0A0J9X4C7 | annotation not available | annotation not available | 0.999 |
A0A0J9X2E5 | A0A0J9YH75 | annotation not available | Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin. | 0.994 |
A0A0J9X4C7 | A0A0F7RS15 | annotation not available | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.999 |
A0A0J9X4C7 | A0A0J9X2E5 | annotation not available | annotation not available | 0.999 |
A0A0J9X4C7 | A0A0J9YH75 | annotation not available | Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin. | 0.993 |
A0A0J9X5J7 | A0A0J9X889 | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component. | annotation not available | 0.891 |
A0A0J9X5J7 | A0A0J9X9R2 | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component. | Similar to Saccharomyces cerevisiae YOR001W RRP6 Nuclear exosome exonuclease component. | 0.999 |
A0A0J9X5J7 | A0A0J9XBA5 | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component. | Similar to Saccharomyces cerevisiae YDL111C RRP42 Exosome non-catalytic core component. | 0.999 |
A0A0J9X5J7 | A0A0J9XEX6 | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component. | Similar to Saccharomyces cerevisiae YHR069C RRP4 Exosome non-catalytic core component. | 0.999 |
A0A0J9X5J7 | A0A0J9XFI2 | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component. | Similar to Saccharomyces cerevisiae YPR189W SKI3 Ski complex component and TPR protein. | 0.928 |
A0A0J9X5J7 | A0A0J9XKY4 | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component. | Similar to Saccharomyces cerevisiae YNL232W CSL4 Exosome non-catalytic core component. | 0.999 |
A0A0J9X5J7 | A0A0J9YH75 | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component. | Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin. | 0.863 |
A0A0J9X889 | A0A0J9X5J7 | annotation not available | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component. | 0.891 |
A0A0J9X889 | A0A0J9X9R2 | annotation not available | Similar to Saccharomyces cerevisiae YOR001W RRP6 Nuclear exosome exonuclease component. | 0.987 |
A0A0J9X889 | A0A0J9XBA5 | annotation not available | Similar to Saccharomyces cerevisiae YDL111C RRP42 Exosome non-catalytic core component. | 0.878 |
A0A0J9X889 | A0A0J9XEX6 | annotation not available | Similar to Saccharomyces cerevisiae YHR069C RRP4 Exosome non-catalytic core component. | 0.921 |
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