STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9YHP5Similar to Saccharomyces cerevisiae YOR070C GYP1 Cis-golgi GTPase-activating protein. (526 aa)    
Predicted Functional Partners:
A0A0J9XF23
annotation not available
    
   0.825
A0A0J9X8R7
Similar to Saccharomyces cerevisiae YFL038C YPT1 Rab family GTPase.
    
 
 0.788
A0A0J9XD07
37S ribosomal protein S24, mitochondrial; Involved in mitochondrial genome encoded proteins translation; Belongs to the mitochondrion-specific ribosomal protein mS35 family.
    
   0.647
A0A0J9XLF8
Belongs to the universal ribosomal protein uS9 family.
    
 
 0.632
A0A0J9X991
annotation not available
    
 
 0.630
A0A0J9XEI7
annotation not available
   
   0.616
A0A0J9XKN7
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.613
A0A0J9X2U0
annotation not available
    
   0.604
A0A0J9X5F0
annotation not available
    
   0.604
A0A0J9X8M9
annotation not available
    
   0.604
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.