STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332095_00528Unannotated protein. (526 aa)    
Predicted Functional Partners:
GCA_000332095_02774
Unannotated protein.
   
 0.736
GCA_000332095_00329
Unannotated protein.
  
 
   0.705
GCA_000332095_02769
Unannotated protein.
  
     0.674
GCA_000332095_00369
Unannotated protein.
  
 
   0.670
GCA_000332095_02776
Unannotated protein.
  
     0.665
GCA_000332095_00782
Unannotated protein.
  
     0.649
GCA_000332095_04764
Unannotated protein.
  
 
  0.628
GCA_000332095_04424
Unannotated protein.
  
     0.626
GCA_000332095_01138
Unannotated protein.
  
     0.624
GCA_000332095_04001
Unannotated protein.
  
     0.619
Your Current Organism:
Leptolyngbya sp. PCC6406
NCBI taxonomy Id: 1173264
Other names: L. sp. PCC 6406, Leptolyngbya sp. ATCC 29125, Leptolyngbya sp. PCC 6406, Pseudanabaena sp. Az Tn
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.