STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV87600.1Hypothetical protein. (271 aa)    
Predicted Functional Partners:
SEV87614.1
NAD-dependent formate dehydrogenase catalytic subunit /NAD-dependent formate dehydrogenase iron-sulfur protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.522
Your Current Organism:
Aliiroseovarius sediminilitoris
NCBI taxonomy Id: 1173584
Other names: A. sediminilitoris, Aliiroseovarius sediminilitoris (Park and Yoon 2013) Park et al. 2015, CCUG 62413, DSM 29439, KCTC 23959, Pseudoroseovarius sediminilitoris, Pseudoroseovarius sediminilitoris (Park and Yoon 2013) Sun et al. 2015, Roseovarius sediminilitoris, Roseovarius sediminilitoris Park and Yoon 2013, Roseovarius sp. M-M10, strain M-M10
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