STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW07111.1Ribosomal-protein-alanine N-acetyltransferase. (146 aa)    
Predicted Functional Partners:
SEW07127.1
tRNA threonylcarbamoyl adenosine modification protein YeaZ.
  
 
 0.910
SEW07141.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
       0.865
SEW07154.1
Nucleotide-binding universal stress protein, UspA family.
       0.741
SEW07097.1
Nucleoside-binding protein.
       0.692
SEW07072.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.691
SEW07042.1
Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
  0.542
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.536
SEW07005.1
Conserved hypothetical protein.
       0.516
SEW07023.1
Hypothetical protein.
       0.516
SEW07086.1
Nucleoside ABC transporter ATP-binding protein.
       0.502
Your Current Organism:
Aliiroseovarius sediminilitoris
NCBI taxonomy Id: 1173584
Other names: A. sediminilitoris, Aliiroseovarius sediminilitoris (Park and Yoon 2013) Park et al. 2015, CCUG 62413, DSM 29439, KCTC 23959, Pseudoroseovarius sediminilitoris, Pseudoroseovarius sediminilitoris (Park and Yoon 2013) Sun et al. 2015, Roseovarius sediminilitoris, Roseovarius sediminilitoris Park and Yoon 2013, Roseovarius sp. M-M10, strain M-M10
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