Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CSUB01_00127 | CSUB01_00540 | A0A066X1N5 | A0A066WYC8 | Putative TGS domain-containing protein. | Uncharacterized protein. | 0.410 |
CSUB01_00127 | CSUB01_00934 | A0A066X1N5 | A0A066XFQ5 | Putative TGS domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.668 |
CSUB01_00127 | CSUB01_07979 | A0A066X1N5 | A0A066XDB9 | Putative TGS domain-containing protein. | Putative TGS domain-containing protein. | 0.718 |
CSUB01_00348 | CSUB01_00540 | A0A066WY41 | A0A066WYC8 | Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12. | Uncharacterized protein. | 0.565 |
CSUB01_00348 | CSUB01_00874 | A0A066WY41 | A0A066X3F2 | Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12. | Putative NOL1/NOP2/sun family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.576 |
CSUB01_00348 | CSUB01_00934 | A0A066WY41 | A0A066XFQ5 | Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.687 |
CSUB01_00348 | CSUB01_01391 | A0A066WY41 | A0A066XKZ2 | Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12. | Putative histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | 0.677 |
CSUB01_00348 | CSUB01_03116 | A0A066WY41 | A0A066XID8 | Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12. | Putative brix domain-containing protein. | 0.540 |
CSUB01_00348 | CSUB01_07355 | A0A066WY41 | A0A066X6P0 | Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12. | Putative methyltransferase domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | 0.666 |
CSUB01_00348 | CSUB01_08097 | A0A066WY41 | A0A066XPG5 | Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.814 |
CSUB01_00540 | CSUB01_00127 | A0A066WYC8 | A0A066X1N5 | Uncharacterized protein. | Putative TGS domain-containing protein. | 0.410 |
CSUB01_00540 | CSUB01_00348 | A0A066WYC8 | A0A066WY41 | Uncharacterized protein. | Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12. | 0.565 |
CSUB01_00540 | CSUB01_00874 | A0A066WYC8 | A0A066X3F2 | Uncharacterized protein. | Putative NOL1/NOP2/sun family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.405 |
CSUB01_00540 | CSUB01_00934 | A0A066WYC8 | A0A066XFQ5 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.566 |
CSUB01_00540 | CSUB01_01391 | A0A066WYC8 | A0A066XKZ2 | Uncharacterized protein. | Putative histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | 0.448 |
CSUB01_00540 | CSUB01_03116 | A0A066WYC8 | A0A066XID8 | Uncharacterized protein. | Putative brix domain-containing protein. | 0.400 |
CSUB01_00540 | CSUB01_04025 | A0A066WYC8 | A0A066XDE9 | Uncharacterized protein. | Putative S-adenosylmethionine-dependent methyltransferase. | 0.430 |
CSUB01_00540 | CSUB01_07355 | A0A066WYC8 | A0A066X6P0 | Uncharacterized protein. | Putative methyltransferase domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | 0.448 |
CSUB01_00540 | CSUB01_07979 | A0A066WYC8 | A0A066XDB9 | Uncharacterized protein. | Putative TGS domain-containing protein. | 0.405 |
CSUB01_00540 | CSUB01_08097 | A0A066WYC8 | A0A066XPG5 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.435 |
page 1 of 4