STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSUB01_00787Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
CSUB01_10730
Putative TATA box binding protein associated factor.
    
 0.996
CSUB01_02214
Bromo domain-containing protein.
   
 0.996
CSUB01_06791
Putative transcription initiation factor TFIID subunit 9.
    
 0.996
CSUB01_10383
SCA7 domain-containing protein.
    
 0.996
CSUB01_10179
Putative transcription initiation factor TFIID subunit A.
    
 0.996
CSUB01_05463
Putative spt3.
    
 0.995
CSUB01_08086
Putative WD domain-containing protein.
   
 0.995
CSUB01_06184
Putative transcription initiation factor TFIID 23-30kDa subunit.
    
 0.991
CSUB01_04923
Putative LisH protein.
   
 0.991
CSUB01_02895
Putative histone acetyltransferase subunit 3.
  
 
 0.984
Your Current Organism:
Colletotrichum sublineola
NCBI taxonomy Id: 1173701
Other names: C. sublineola, CBS 131301, Colletotrichum sublineolum, S3.001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.