STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSUB01_06589Putative 3'-5' exonuclease. (882 aa)    
Predicted Functional Partners:
CSUB01_03375
Putative WD repeat domain-containing protein mip1.
   
 0.982
CSUB01_07155
Uncharacterized protein.
   
 0.981
CSUB01_03097
Putative WD domain-containing protein.
    
 0.980
CSUB01_04039
Putative stress-activated map kinase-interacting protein.
    
 0.978
CSUB01_06805
Uncharacterized protein.
    
 0.970
CSUB01_06909
Putative exosome complex exonuclease RRP43.
    
  0.966
CSUB01_01858
Putative telomere length regulation protein.
    
 0.962
CSUB01_04015
Uncharacterized protein.
    
 0.961
CSUB01_03035
Putative HEAT repeat protein.
   
 0.955
CSUB01_02083
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
   
 0.926
Your Current Organism:
Colletotrichum sublineola
NCBI taxonomy Id: 1173701
Other names: C. sublineola, CBS 131301, Colletotrichum sublineolum, S3.001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.