STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSUB01_09274NMT1 domain-containing protein. (344 aa)    
Predicted Functional Partners:
CSUB01_07156
Putative phosphomethylpyrimidine kinase.
     
 0.962
CSUB01_07243
Putative pyridoxine biosynthesis protein; Belongs to the PdxS/SNZ family.
    
 0.903
CSUB01_06557
Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...]
  
  
 0.838
CSUB01_01809
Putative glycerophosphoryl diester phosphodiesterase.
    
  0.742
CSUB01_01910
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.732
CSUB01_09815
Putative cytochrome b5-like Heme/Steroid binding domain-containing protein.
    
  0.732
CSUB01_07242
Putative SNO glutamine amidotransferase.
     
 0.725
CSUB01_05988
Putative down-regulated in metastasis.
   
  0.601
CSUB01_02685
Putative NOSIC domain-containing protein.
    
  0.583
CSUB01_08281
Utp12 domain-containing protein.
    
  0.583
Your Current Organism:
Colletotrichum sublineola
NCBI taxonomy Id: 1173701
Other names: C. sublineola, CBS 131301, Colletotrichum sublineolum, S3.001
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