STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK75390.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (235 aa)    
Predicted Functional Partners:
SDH78299.1
Surfactin family lipopeptide synthetase A.
 
 0.972
SDI17053.1
Acyl carrier protein.
  
 0.888
SDK90717.1
Glutamate synthase domain-containing protein 2.
     
 0.785
SDI17159.1
Phosphopantetheine attachment site.
 
 0.692
SDK75362.1
Putative NADPH-quinone reductase (modulator of drug activity B).
       0.625
SDI24438.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.623
SDI17018.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.603
SDI25896.1
PTS system, fructose-specific IIC component.
  
 0.603
SDH78429.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
  
 0.596
SDI16837.1
Amino acid adenylation domain-containing protein.
  
 0.596
Your Current Organism:
Paenibacillus typhae
NCBI taxonomy Id: 1174501
Other names: CGMCC 1.11012, DSM 25190, P. typhae, Paenibacillus sp. enrichment culture clone xj7, Paenibacillus sp. xj7, Paenibacillus typhae Kong et al. 2013, strain xj7
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