STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000305495_01845Unannotated protein. (119 aa)    
Predicted Functional Partners:
GCA_000305495_03981
Unannotated protein.
 
 0.984
GCA_000305495_03979
Unannotated protein.
 
 0.927
GCA_000305495_02574
Unannotated protein.
 
 
 0.909
GCA_000305495_02545
Unannotated protein.
 
 0.899
GCA_000305495_04761
Unannotated protein.
 
  
  0.899
GCA_000305495_03964
Unannotated protein.
 
 
 0.889
GCA_000305495_02546
Unannotated protein.
 
 0.879
GCA_000305495_01921
Unannotated protein.
 
  
  0.851
GCA_000305495_00711
Unannotated protein.
 
  
  0.847
GCA_000305495_00874
Unannotated protein.
 
 0.847
Your Current Organism:
Bacillus psychrosaccharolyticus
NCBI taxonomy Id: 1174504
Other names: B. psychrosaccharolyticus ATCC 23296, Bacillus psychrosaccharolyticus ATCC 23296, Bacillus psychrosaccharolyticus CECT 4074, Bacillus psychrosaccharolyticus DSM 6, Bacillus psychrosaccharolyticus NBRC 101233, Bacillus psychrosaccharolyticus str. ATCC 23296, Bacillus psychrosaccharolyticus strain ATCC 23296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.