STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000305495_04649Unannotated protein. (316 aa)    
Predicted Functional Partners:
GCA_000305495_04647
Unannotated protein.
 
  
 0.994
GCA_000305495_04651
Unannotated protein.
 
  
 0.993
GCA_000305495_04648
Unannotated protein.
 
  
 0.991
GCA_000305495_04646
Unannotated protein.
  
  
 0.952
GCA_000305495_04653
Unannotated protein.
  
  
 0.860
GCA_000305495_04650
Unannotated protein.
       0.773
GCA_000305495_04644
Unannotated protein.
 
     0.698
GCA_000305495_04645
Unannotated protein.
       0.553
GCA_000305495_03160
Unannotated protein.
   
    0.522
GCA_000305495_03164
Unannotated protein.
   
    0.522
Your Current Organism:
Bacillus psychrosaccharolyticus
NCBI taxonomy Id: 1174504
Other names: B. psychrosaccharolyticus ATCC 23296, Bacillus psychrosaccharolyticus ATCC 23296, Bacillus psychrosaccharolyticus CECT 4074, Bacillus psychrosaccharolyticus DSM 6, Bacillus psychrosaccharolyticus NBRC 101233, Bacillus psychrosaccharolyticus str. ATCC 23296, Bacillus psychrosaccharolyticus strain ATCC 23296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.