STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308215_00548Unannotated protein. (130 aa)    
Predicted Functional Partners:
GCA_000308215_01875
Unannotated protein.
 
    0.864
GCA_000308215_01968
Unannotated protein.
   
 
 0.591
GCA_000308215_01873
Unannotated protein.
  
     0.550
GCA_000308215_00549
Unannotated protein.
       0.533
GCA_000308215_00358
Unannotated protein.
 
 0.525
GCA_000308215_00216
Unannotated protein.
    
 
 0.510
GCA_000308215_02453
Unannotated protein.
    
 
 0.510
GCA_000308215_02620
Unannotated protein.
  
 
 0.480
GCA_000308215_00547
Unannotated protein.
       0.461
GCA_000308215_00024
Unannotated protein.
  
 0.402
Your Current Organism:
Methanomassiliicoccus luminyensis
NCBI taxonomy Id: 1175296
Other names: M. luminyensis B10, Methanomassiliicoccus luminyensis B10, Methanomassiliicoccus luminyensis str. B10, Methanomassiliicoccus luminyensis strain B10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.