STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308215_01441Unannotated protein. (363 aa)    
Predicted Functional Partners:
GCA_000308215_01442
Unannotated protein.
 
 
 0.968
GCA_000308215_00611
Unannotated protein.
    
  0.941
GCA_000308215_02353
Unannotated protein.
  
  
  0.914
GCA_000308215_01361
Unannotated protein.
    
  0.880
GCA_000308215_00450
Unannotated protein.
 
 
 0.825
GCA_000308215_02352
Unannotated protein.
 
 
 0.825
GCA_000308215_02354
Unannotated protein.
 
 
 0.823
GCA_000308215_01736
Unannotated protein.
 
 
 0.822
GCA_000308215_00687
Unannotated protein.
    
  0.812
GCA_000308215_00845
Unannotated protein.
    
  0.812
Your Current Organism:
Methanomassiliicoccus luminyensis
NCBI taxonomy Id: 1175296
Other names: M. luminyensis B10, Methanomassiliicoccus luminyensis B10, Methanomassiliicoccus luminyensis str. B10, Methanomassiliicoccus luminyensis strain B10
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.