STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308215_01469Unannotated protein. (171 aa)    
Predicted Functional Partners:
GCA_000308215_01468
Unannotated protein.
 
  
 0.936
GCA_000308215_00709
Unannotated protein.
  
     0.454
GCA_000308215_01472
Unannotated protein.
     
 0.431
GCA_000308215_01384
Unannotated protein.
  
     0.429
GCA_000308215_01590
Unannotated protein.
  
     0.423
GCA_000308215_01470
Unannotated protein.
       0.422
GCA_000308215_01473
Unannotated protein.
     
 0.414
GCA_000308215_01481
Unannotated protein.
  
     0.402
GCA_000308215_01383
Unannotated protein.
  
     0.400
Your Current Organism:
Methanomassiliicoccus luminyensis
NCBI taxonomy Id: 1175296
Other names: M. luminyensis B10, Methanomassiliicoccus luminyensis B10, Methanomassiliicoccus luminyensis str. B10, Methanomassiliicoccus luminyensis strain B10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.