STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308215_02002Unannotated protein. (449 aa)    
Predicted Functional Partners:
GCA_000308215_01629
Unannotated protein.
    
  0.861
GCA_000308215_02003
Unannotated protein.
       0.828
GCA_000308215_02473
Unannotated protein.
  
 
 0.782
GCA_000308215_02004
Unannotated protein.
       0.779
GCA_000308215_00708
Unannotated protein.
  
     0.660
GCA_000308215_02005
Unannotated protein.
  
    0.492
GCA_000308215_00454
Unannotated protein.
  
  
 0.437
GCA_000308215_02178
Unannotated protein.
 
  
 0.434
GCA_000308215_02275
Unannotated protein.
 
  
 0.418
GCA_000308215_01892
Unannotated protein.
  
     0.413
Your Current Organism:
Methanomassiliicoccus luminyensis
NCBI taxonomy Id: 1175296
Other names: M. luminyensis B10, Methanomassiliicoccus luminyensis B10, Methanomassiliicoccus luminyensis str. B10, Methanomassiliicoccus luminyensis strain B10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.