Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GWL_01270Two-component system sensor histidine kinase/response regulator protein. (122 aa)    
Predicted Functional Partners:
GWL_30960
Hypothetical protein.
 
 0.973
GWL_01260
Methyl-accepting chemotaxis protein.
 
  0.966
GWL_31040
Two component hybrid sensor histidine kinase/response regulator protein.
 
0.965
GWL_01290
Chemotaxis histidine kinase.
 0.956
GWL_12560
Histidine-containing phosphotransfer (HPt) domain-containing protein.
  
 0.951
GWL_30950
Hypothetical protein.
 
 0.947
GWL_24770
Sensor histidine kinase.
 
0.938
GWL_30250
Hypothetical protein.
 
 0.936
GWL_01310
Positive regulator of CheA protein activity protein.
 
 
 0.931
GWL_19200
Chemotaxis histidine kinase.
 
 0.930
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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