Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_01550Membrane transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (683 aa)    
Predicted Functional Partners:
GWL_01560
Hypothetical protein.
 
    0.932
GWL_01570
Two component transmembrane sensor histidine kinase.
 
     0.709
GWL_01580
Two component response regulator protein.
 
     0.575
GWL_23700
Malate synthase; Belongs to the malate synthase family.
  
  
 0.560
GWL_33490
Sugar phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
  
  
 0.501
GWL_02840
Acetyl-coenzyme A synthetase.
  
  
 0.492
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.492
GWL_24650
propionyl-CoA ligase.
  
  
 0.492
GWL_42000
Acetyl-coenzyme A synthetase.
  
  
 0.492
GWL_15420
Isocitrate lyase.
   
  
 0.484
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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