Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_03040K+ transport flavoprotein. (427 aa)    
Predicted Functional Partners:
GWL_02980
Aliphatic nitrilase.
 
 
 0.938
GWL_03000
Histone acetyltransferase HPA2.
 
     0.926
GWL_03020
Putative glycocyl transferase/mannosyl transferase protein.
 
   0.926
GWL_03010
AIR synthase-like protein.
 
   
 0.923
GWL_02990
Radical SAM protein.
 
     0.921
GWL_03030
Hypothetical protein.
 
     0.921
GWL_02970
Hypothetical protein.
 
   
 0.914
GWL_38150
Aliphatic nitrilase.
 
 
 0.648
GWL_20240
Poly(3-hydroxybutyrate) depolymerase.
    
 0.646
dnaJ
Molecular chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...]
    
 
 0.643
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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