Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GWL_03080Transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (307 aa)    
Predicted Functional Partners:
GWL_38260
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.763
GWL_38420
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.751
GWL_03870
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.750
GWL_27180
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.743
GWL_23390
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.740
GWL_16700
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.731
GWL_08790
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.730
GWL_09100
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.721
GWL_00430
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.716
GWL_17840
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.712
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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