Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_03430Hypothetical protein. (180 aa)    
Predicted Functional Partners:
GWL_19250
Signal peptidase I (SPase I) family protein; Belongs to the peptidase S26 family.
   
    0.922
GWL_17800
Hypothetical protein.
   
    0.868
minE
Septum formation topological specificity factor protein; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.868
GWL_06790
Phosphate transport system regulatory protein; Plays a role in the regulation of phosphate uptake.
   
    0.808
GWL_32960
Outer-membrane lipoprotein lolB precursor lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
   
    0.711
GWL_03420
Hypothetical protein.
 
    0.667
GWL_40600
Major facilitator superfamily permease.
   
    0.586
GWL_13780
Signal peptidase I (SPase I) family protein; Belongs to the peptidase S26 family.
   
    0.584
GWL_26850
Transmembrane Tfp pilus assembly FimV protein.
   
    0.575
GWL_33540
RNA polymerase sigma-N (sigma-54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.510
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.