Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GWL_03530Metal ion ABC transporter periplasmic component/surface antigen protein; Belongs to the nlpA lipoprotein family. (265 aa)    
Predicted Functional Partners:
GWL_03540
Metal ion ABC transporter permease.
 0.999
metN
Metal ion ABC transporter ATPase; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.999
GWL_10940
Sulfate ABC transporter permease.
  
 
 0.819
GWL_26740
O-acetylhomoserine sulfhydrylase.
  
    0.807
cysA
Sulfate/molybdate ABC transporter ATPase; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
  
 
 0.782
GWL_15430
Sulfate/molybdate ABC transporter ATPase.
  
 
 0.782
GWL_25120
Mn2+/Zn2+ ABC transporter ATPase.
    
 0.780
GWL_01050
Sulfate ABC transporter permease.
   
 
  0.753
GWL_10930
Sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 
  0.753
GWL_25110
Mn2+/Zn2+ ABC transporters permease.
    
 0.753
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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