Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_03740Major facilitator superfamily protein. (384 aa)    
Predicted Functional Partners:
GWL_03750
Cyclase.
 
    0.943
GWL_03760
Cupin superfamily protein.
 
     0.913
GWL_03710
Glyoxalase II protein.
 
  
 0.906
GWL_03730
FAD-dependent 2-polyprenyl-6-methoxyphenol hydroxylase.
 
     0.869
GWL_03700
Hypothetical protein.
 
     0.849
GWL_03690
Hypothetical protein.
 
     0.798
GWL_03770
Fumarylacetoacetate hydrolase family protein.
 
     0.792
GWL_03720
Rieske (2Fe-2S) domain-containing protein.
 
  
  0.744
GWL_03780
UDP-glucose 4-epimerase.
 
     0.712
GWL_29430
Hypothetical protein.
  
     0.655
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.