Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_039102-keto-3-deoxygalactonate kinase. (321 aa)    
Predicted Functional Partners:
GWL_03900
2-dehydro-3-deoxy-6-phosphogalactonate aldolase.
 
 
 0.996
GWL_03890
Galactonate dehydratase.
 
 
 0.990
GWL_04080
Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.875
GWL_03920
Galactose-1-epimerase.
 
     0.843
GWL_21700
D-galactose-1-dehydrogenase.
 
   
 0.624
GWL_04050
Gluconolactonase.
 
     0.532
GWL_04670
2-keto-4-hydroxyglutarate aldolase/-keto-3-deoxy-6-phosphogluconate aldolase.
    
 0.520
GWL_38610
Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.516
GWL_32590
Altronate hydrolase.
  
     0.502
GWL_04010
Dehydrogenase oxidoreductase.
  
   
 0.500
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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