Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_03950Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (355 aa)    
Predicted Functional Partners:
GWL_03940
Sugar ABC transporter ATPase.
 
 0.997
GWL_03930
Sugar ABC transporter periplasmic protein.
 
 0.993
GWL_03960
Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.983
GWL_03980
Sugar ABC transporter ATPase.
 
 0.950
GWL_17110
Sugar ABC transporter periplasmic protein.
 
 0.948
GWL_04130
Sugar ABC transporter periplasmic protein.
 
 0.933
xylG
D-xylose ABC transporter ATPase; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.921
rbsA
Sugar ABC transporter ATPase; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.916
GWL_17120
Sugar ABC transporter ATPase.
 
 0.913
rbsA-2
Sugar ABC transporter ATPase; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.909
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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