Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_04500Zinc-containing alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (335 aa)    
Predicted Functional Partners:
GWL_35400
Ring-opening enzyme protein.
  
 0.854
GWL_18480
Hypothetical protein.
   
 0.849
GWL_10410
Medium-chain-fatty-acid CoA ligase.
   
 0.790
GWL_31910
long-chain-fatty-acid-CoA ligase.
   
 0.790
GWL_32420
long-chain-fatty-acid-CoA ligase.
   
 0.790
GWL_33890
Long chain acyl-CoA synthetase.
   
 0.790
GWL_37880
Hypothetical protein.
   
 0.790
GWL_40660
acyl-CoA synthetase/AMP-acid ligase II protein.
   
 0.790
dnaJ
Molecular chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...]
   
 0.788
GWL_44100
Phosphate acetyltransferase.
  
 0.771
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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