Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_04980GNAT family acetyltransferase. (300 aa)    
Predicted Functional Partners:
GWL_05000
glycine/D-amino acid oxidase.
 
  
  0.903
GWL_05110
glycine/D-amino acid oxidase.
  
  
  0.828
GWL_44060
glycine/D-amino acid oxidase.
  
  
  0.824
GWL_05040
HAD superfamily haloalkanoic acid dehalogenase.
 
    0.818
GWL_44050
Hypothetical Protein.
 
    0.781
GWL_05050
Dipeptide ABC transporter periplasmic peptide-binding protein.
  
     0.764
GWL_18640
Family 5 extracellular solute-binding protein.
  
     0.761
GWL_19710
Hypothetical protein.
   
 
 0.741
GWL_18630
Haloacid dehalogenase-like hydrolase protein.
 
    0.732
aroB
3-dehydroquinate synthase/shikimate kinase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
    
  0.725
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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