Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_05490Putative glycosyltransferase. (328 aa)    
Predicted Functional Partners:
GWL_14980
TPR repeat containing protein.
 
 0.916
GWL_15150
undecaprenyl-phosphate-4-amino-L-arabinose-- lipid A 4-amino-L-arabinosyltransferase.
 
 
 0.901
GWL_15090
Xylanase/chitin deacetylase.
 
 
 0.873
GWL_05480
Hypothetical protein.
 
 
 0.865
GWL_05500
Hypothetical protein.
 
     0.798
GWL_14170
Glucosyltransferase involved in lipopolysaccharide synthesis protein.
  
  
 0.729
GWL_14310
GDP-mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.660
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
   
 
  0.619
GWL_15110
methionyl-tRNA formyltransferase.
 
 
 0.611
GWL_02670
undecaprenyl-phosphate-4-amino-L-arabinose-- lipid A 4-amino-L-arabinosyltransferase.
  
 
 0.586
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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