Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_05520Glucarate dehydratase. (459 aa)    
Predicted Functional Partners:
GWL_24910
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
  
 0.975
GWL_24940
D-galactarate dehydratase.
 
 
 0.968
GWL_05140
NAD-dependent betaine aldehyde dehydrogenase.
     
 0.878
GWL_16670
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.877
GWL_05400
Mandelate racemase/muconate lactonizing.
  
  
 
0.845
GWL_03190
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.816
GWL_44660
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.815
GWL_32590
Altronate hydrolase.
 
 
 0.806
GWL_41470
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.708
GWL_13360
NAD+ dependent acetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.559
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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