Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_05780Small-conductance mechanosensitive channel protein. (452 aa)    
Predicted Functional Partners:
GWL_05760
tRNA and rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
     0.803
GWL_05770
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
       0.675
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.644
GWL_05790
stearoyl-CoA desaturase oxidoreductase.
       0.641
GWL_37260
Multiple antibiotic resistance protein.
  
    0.553
GWL_05740
Hypothetical protein.
       0.471
recO
DNA repair protein; Involved in DNA repair and RecF pathway recombination.
 
    0.465
GWL_33470
Glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.464
GWL_37680
Glutathione-regulated potassium-efflux system transmembrane protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.432
GWL_00940
N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily.
  
    0.431
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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