Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_05890Hypothetical protein. (154 aa)    
Predicted Functional Partners:
GWL_16780
Hypothetical protein.
 
  
 0.715
GWL_27960
Two component hybrid sensor histidine kinase/response regulator protein.
  
  
 0.708
GWL_11430
Proline/glycine betaine ABC transporter periplasmic substrate-binding protein.
  
    0.702
GWL_01280
Anti-sigma-factor antagonist (STAS) domain-containing protein.
   
  
 0.694
GWL_39830
Cytochrome c2 protein.
   
 
 0.628
GWL_29890
Hypothetical protein.
    
   0.567
GWL_29900
Hypothetical protein.
    
   0.567
GWL_01970
Bacterioferritin; Iron-storage protein.
   
  
 0.531
GWL_05930
Bacterioferritin.
   
  
 0.531
GWL_06020
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
  
 0.518
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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