Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_05950Hypothetical protein. (125 aa)    
Predicted Functional Partners:
GWL_05940
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
    0.929
GWL_06020
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
    0.737
GWL_16010
Hypothetical protein.
  
     0.734
GWL_16000
Multidrug ABC transporter ATPase/permease.
  
     0.690
GWL_05930
Bacterioferritin.
 
    0.664
GWL_05960
Periplasmic or secreted lipoprotein.
 
     0.616
GWL_36860
Signal peptide protein.
  
     0.596
GWL_13160
Phosphate starvation-inducible protein.
  
    0.595
GWL_05900
Hypothetical protein.
  
    0.578
GWL_36890
Transmembrane protein.
  
     0.570
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.