Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_06270Alcohol dehydrogenase superfamily, zinc-containing:Alcohol dehydrogenase, zinc-containing. (351 aa)    
Predicted Functional Partners:
GWL_21730
Esterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.989
GWL_03220
Alcohol dehydrogenase.
  
 
0.887
GWL_30860
Maleylacetate reductase.
    
 0.830
GWL_43250
4-hydroxybutyrate dehydrogenase.
    
 0.830
GWL_04600
L-idonate 5-dehydrogenase.
  
 
 0.825
tadA
Cytosine/adenosine deaminases protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.815
GWL_06250
Hypothetical protein.
     
 0.792
GWL_06240
Hypothetical protein.
     
 0.791
GWL_06260
Methyltransferase.
     
 0.789
GWL_06230
Putative transketolase.
       0.786
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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