Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
GWL_06360Biopolymer transport ExbD/TolR protein. (144 aa)    
Predicted Functional Partners:
tolQ
MotA/TolQ/ExbB proton channel family protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.992
tolB
Periplasmic component of the Tol biopolymer transport system protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.958
GWL_06350
Hypothetical protein.
  
 
 0.954
pal
Putative peptidoglycan-associated lipoprotein (pal); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 
 0.947
GWL_01110
Biopolymer transport transmembrane protein.
 
 
 0.944
GWL_01990
Biopolymer transport transmembrane protein.
 
 
 0.922
GWL_17520
Biopolymer transport transmembrane protein.
 
 
 0.916
GWL_25610
Biopolymer transport transmembrane protein.
 
 
 0.911
GWL_44360
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.890
cpoB
Tol-Pal cell envelope complex subunit YbgF protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
  
 0.857
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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