Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_08170ABC transporter ATPase. (522 aa)    
Predicted Functional Partners:
GWL_08190
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
GWL_08200
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
GWL_08210
ABC transporter periplasmic/surface lipoprotein.
 
 
 0.994
GWL_36510
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.987
GWL_36500
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.986
GWL_36520
ABC transporter periplasmic/surface lipoprotein.
 
 
 0.939
GWL_36490
ABC transporter ATPase.
  
  
 
0.897
GWL_08180
Cysteine hydrolase falmily protein.
 
     0.869
GWL_08160
Isochorismatase family protein.
 
     0.855
GWL_08150
Hypothetical protein.
 
     0.820
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.