Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GWL_08860Amino acid ABC transporter permease. (223 aa)    
Predicted Functional Partners:
GWL_08850
ABC polar amino acid transporter, ATPase subunit.
 
 0.998
GWL_08870
Amino acid ABC transporter permease.
 
  
 
0.980
GWL_08840
Amino acid ABC transporter solute-binding protein.
 
  0.957
GWL_05600
Amino acid ABC transporter ATPase.
 
 0.954
GWL_17030
Glutamine ABC transporter ATPase.
 
 0.954
GWL_42340
Glutamine ABC transporter ATPase.
 
 0.954
GWL_18120
Putative amino acid ABC transporter ATP-binding protein.
 
 0.953
GWL_41250
ABC transporter ATP-binding protein.
 
 0.953
GWL_32290
Glutamate/aspartate ABC transporter ATPase.
 
 0.951
GWL_09480
Amino acid ABC transporter ATPase.
 
 0.948
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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