Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GWL_08990Aldehyde dehydrogenase, NAD-dependent; Belongs to the aldehyde dehydrogenase family. (492 aa)    
Predicted Functional Partners:
GWL_08970
Hypothetical protein; Belongs to the TPP enzyme family.
 
 
 0.857
GWL_33030
Glutamate synthase large subunit oxidoreductase.
  
 
 0.857
GWL_09000
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.843
GWL_08960
Short chain dehydrogenase.
 
 
  0.819
GWL_08940
Alpha/beta hydrolase fold family.
 
  
  0.781
GWL_43670
Proline dehydrogenase/proline oxidase delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 0.761
nadX
L-aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
     0.753
GWL_08950
IclR family transcriptional regulator.
    
  0.747
GWL_09020
Hypothetical protein.
   
  0.741
GWL_08930
Hypothetical protein.
  
 0.738
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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