Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_09400Naphthocyclinone hydroxylase. (395 aa)    
Predicted Functional Partners:
GWL_05310
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.967
GWL_43980
3-hydroxyacyl-CoA dehydrogenase oxidoreductase.
  
 0.938
GWL_09360
Hypothetical protein.
 
     0.838
GWL_09530
Electron transfer flavoprotein subunit alpha.
  
 0.824
GWL_09520
Electron transfer flavoprotein subunit beta.
  
 
 0.793
GWL_07360
Hypothetical protein.
 
     0.786
GWL_07270
Phenylpropionate dioxygenase small subunit.
 
     0.779
GWL_07280
Phenylpropionate dioxygenase large terminal subunit.
  
     0.766
GWL_01870
Flavin reductase domain, FMN-binding protein.
 
  
 0.760
GWL_44100
Phosphate acetyltransferase.
  
 0.753
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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