Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_10180Transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (312 aa)    
Predicted Functional Partners:
GWL_10190
Transmembrane oxidoreductase.
 
     0.739
GWL_25280
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.726
GWL_12690
Transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.720
GWL_27180
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.710
GWL_03170
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.709
GWL_22160
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.707
GWL_16700
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.666
GWL_31820
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.663
GWL_03870
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.658
GWL_10260
Membrane associated protein.
 
     0.657
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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