Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_10420Signal peptide protein. (70 aa)    
Predicted Functional Partners:
GWL_10440
Copper tolerance protein.
 
 
 0.935
GWL_10430
Multicopper oxidase.
 
   
 0.888
GWL_14120
Transcription regulator protein.
   
  
 0.722
GWL_05930
Bacterioferritin.
   
    0.678
GWL_18110
Cation efflux system protein cusF precursor.
  
     0.649
GWL_13980
Hypothetical protein.
   
    0.628
GWL_18100
Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.612
GWL_17770
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.610
GWL_17760
Cation efflux system protein cusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.609
GWL_21270
Transglycosylase-associated protein.
  
    0.506
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.