Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_10440Copper tolerance protein. (460 aa)    
Predicted Functional Partners:
GWL_10430
Multicopper oxidase.
 
   
 0.954
macB
Antimicrobial peptide ABC transporter ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 0.939
GWL_10420
Signal peptide protein.
 
 
 0.935
GWL_17760
Cation efflux system protein cusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.868
GWL_19300
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.765
GWL_12390
Type I antifreeze protein:HlyD family secretion protein.
  
 0.748
GWL_12580
Type I antifreeze protein:HlyD family secretion protein.
  
 0.748
GWL_15310
Multidrug resistance efflux pump protein.
  
 0.748
GWL_21660
Multidrug resistance A (translocase) transmembrane secretion protein.
  
 0.748
GWL_22320
Hemolysin secretion-related transmembrane protein.
  
 0.748
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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