Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_10690Dehydrogenase oxidoreductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (326 aa)    
Predicted Functional Partners:
GWL_04580
Gluconokinase; Belongs to the FGGY kinase family.
 
  
 0.899
GWL_31980
Glycolate oxidase (FAD-linked subunit) oxidoreductase.
   
 0.898
GWL_31970
Glycolate oxidase iron-sulfur subunit oxidoreductase.
   
 0.897
GWL_02210
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
   
 0.895
GWL_14410
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
    
 0.885
GWL_23700
Malate synthase; Belongs to the malate synthase family.
  
 
 0.885
GWL_11210
Gluconolactonase.
  
 
 0.884
GWL_31960
Glycolate oxidase iron-sulfur subunit oxidoreductase.
    
 0.884
GWL_38230
Gluconolactonase.
  
 
 0.883
GWL_27520
Choline dehydrogenase.
   
 
 0.882
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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