Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_11340Hypothetical protein. (276 aa)    
Predicted Functional Partners:
GWL_11330
Putative signal peptide protein.
 
  
 0.981
GWL_11350
Thiamine biosynthesis lipoprotein, apbe family; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
    0.957
GWL_11310
Hypothetical protein.
 
   
 0.919
GWL_11360
Oxidoreductase FAD/NAD(P)-binding:flavodoxin/nitric oxide synthase.
 
     0.918
GWL_13320
Fe3+ ABC transporter periplasmic protein.
   
    0.826
GWL_04810
Sulfite reductase, flavoprotein component.
 
     0.622
GWL_01100
Biopolymer transport ExbD/TolR protein.
   
    0.536
GWL_01980
Biopolymer transport ExbD/TolR protein.
   
    0.536
GWL_25600
Biopolymer transport ExbD/TolR protein.
   
    0.536
GWL_27020
Phospholipase A1 protein; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
  
     0.518
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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