Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_11440Proline/glycine betaine ABC transporters permease. (216 aa)    
Predicted Functional Partners:
GWL_11430
Proline/glycine betaine ABC transporter periplasmic substrate-binding protein.
 
 0.999
GWL_11450
Proline/glycine betaine ABC transporter ATPase.
 
 0.999
GWL_11420
Proline/glycine betaine ABC transporter permease.
 
 
 
0.983
GWL_12590
Multidrug ABC transporter ATPase.
    
  0.882
GWL_28310
Oligopeptide ABC transporter periplasmic protein.
   
 
 0.767
GWL_33530
ABC transporter ATPase.
    
  0.766
GWL_06740
Phosphate ABC transporter periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
     
  0.763
GWL_18400
Pyoverdine synthetase E, pdvE.
     
  0.763
GWL_25110
Mn2+/Zn2+ ABC transporters permease.
     
  0.763
GWL_46480
ABC-2 type transporter.
     
  0.763
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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