Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
GWL_12280Alpha/beta hydrolase superfamily protein. (268 aa)    
Predicted Functional Partners:
GWL_08760
2-oxoglutarate dehydrogenase E3 component lipoamide dehydrogenase.
   
 0.760
GWL_17820
Dihydrolipoamide dehydrogenase.
   
 0.760
GWL_23110
2-oxoglutarate dehydrogenase oxidoreductase.
   
  0.692
GWL_30680
Acyl carrier protein.
   
 0.682
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.681
GWL_30690
Acyl carrier protein.
   
 0.681
GWL_43670
Proline dehydrogenase/proline oxidase delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.655
GWL_08750
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.651
GWL_17410
Hypothetical protein.
    
 0.651
GWL_23100
Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
    
 0.651
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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