Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_12740Dipeptide ABC transporter periplasmic protein. (523 aa)    
Predicted Functional Partners:
GWL_12750
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
 0.999
GWL_12760
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
 0.999
GWL_12730
ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 0.987
GWL_12870
Putative glutathione transporter, permease component.
 0.971
GWL_10210
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
 0.968
GWL_12880
Putative glutathione transporter, permease component.
 0.957
GWL_25260
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
 0.953
GWL_05070
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
 0.947
GWL_40760
Binding-protein-dependent transport systems inner membrane component.
 
 0.939
GWL_10200
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
 0.937
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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