Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_14590Anti-sigma-28 factor protein. (106 aa)    
Predicted Functional Partners:
fliA
Flagellar operon RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
  
 0.998
GWL_14940
Flagellin-specific chaperone FliS.
  
 
 0.985
GWL_14580
Flagellar biosynthesis/type III secretory pathway chaperone protein.
  
  
 0.984
GWL_14600
Flagellar basal body P-ring formation protein.
  
  
 0.952
GWL_14610
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.944
GWL_14620
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
  
  
 0.940
GWL_14630
Flagellar basal-body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.
  
  
 0.940
GWL_14700
Flagellar hook-associated FlgK protein; Belongs to the flagella basal body rod proteins family.
  
  
 0.937
GWL_14640
Flagellar basal-body rod protein FlgE.
  
 
 0.935
GWL_14820
Flagellar transmembrane protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.916
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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