Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_14880Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (593 aa)    
Predicted Functional Partners:
GWL_14870
Flagellar motor switch protein FliG.
 
 0.999
GWL_14800
Flagellar motor switch/type III secretion protein.
 
 0.998
GWL_14810
Flagellar motor switch protein FliM.
 
 0.998
fliE
Flagellar hook-basal body protein.
 
 
 0.998
GWL_14610
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.997
GWL_14620
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.997
GWL_14640
Flagellar basal-body rod protein FlgE.
 
 
 0.997
GWL_14660
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
 
 
 0.997
flgI
Flagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.997
fliQ
Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.997
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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